Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 RBM17P3-201ENST00000417687 1192 ntBASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 AC093909.1-201ENST00000504731 1122 ntBASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 AL138831.2-201ENST00000606564 490 ntBASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 AC023511.2-201ENST00000618803 211 ntBASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 IL9RP2-201ENST00000423948 1312 ntBASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 AC073130.3-201ENST00000624389 2278 ntBASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC10Q9NYD6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
HOXC10Q9NYD6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC10Q9NYD6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC10Q9NYD6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC10Q9NYD6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
HOXC10Q9NYD6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.91■□□□□ 0.94
HOXC10Q9NYD6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.91■□□□□ 0.94
HOXC10Q9NYD6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.91■□□□□ 0.94
HOXC10Q9NYD6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.91■□□□□ 0.94
HOXC10Q9NYD6 AL499627.1-201ENST00000569373 2188 ntBASIC20.91■□□□□ 0.94
HOXC10Q9NYD6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC10Q9NYD6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.91■□□□□ 0.94
HOXC10Q9NYD6 LINC01126-201ENST00000623515 1646 ntBASIC20.91■□□□□ 0.94
HOXC10Q9NYD6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
HOXC10Q9NYD6 AF228730.7-201ENST00000641842 219 ntBASIC20.91■□□□□ 0.94
HOXC10Q9NYD6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 INTS4P1-201ENST00000438455 1935 ntBASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 AC125634.1-201ENST00000438758 1403 ntBASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 KRT18P65-201ENST00000439811 1286 ntBASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 RNPS1P1-201ENST00000507437 918 ntBASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 MTDHP3-201ENST00000594186 672 ntBASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 GPALPP1-207ENST00000611650 899 ntBASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 AC148477.8-201ENST00000624298 468 ntBASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXC10Q9NYD6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
HOXC10Q9NYD6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
HOXC10Q9NYD6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
HOXC10Q9NYD6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HOXC10Q9NYD6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
HOXC10Q9NYD6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HOXC10Q9NYD6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXC10Q9NYD6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HOXC10Q9NYD6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXC10Q9NYD6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXC10Q9NYD6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.89■□□□□ 0.93
HOXC10Q9NYD6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
HOXC10Q9NYD6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.89■□□□□ 0.93
HOXC10Q9NYD6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.89■□□□□ 0.93
HOXC10Q9NYD6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.89■□□□□ 0.93
HOXC10Q9NYD6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HOXC10Q9NYD6 AC011467.2-201ENST00000598425 242 ntBASIC20.89■□□□□ 0.93
HOXC10Q9NYD6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.89■□□□□ 0.93
HOXC10Q9NYD6 AC117500.6-201ENST00000624871 588 ntBASIC20.89■□□□□ 0.93
HOXC10Q9NYD6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.89■□□□□ 0.93
HOXC10Q9NYD6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXC10Q9NYD6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
HOXC10Q9NYD6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC10Q9NYD6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXC10Q9NYD6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXC10Q9NYD6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXC10Q9NYD6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC10Q9NYD6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXC10Q9NYD6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HOXC10Q9NYD6 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms