Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 STARP1-201ENST00000397973 869 ntBASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 AC063952.2-201ENST00000498792 1227 ntBASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 MIR3917-201ENST00000580971 93 ntBASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 AL590326.2-201ENST00000625139 305 ntBASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PARPBPQ9NWS1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 AL163051.1-201ENST00000569214 1512 ntBASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PARPBPQ9NWS1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 FAM8A6P-201ENST00000407496 1135 ntBASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PARPBPQ9NWS1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.37■□□□□ 0.21
PARPBPQ9NWS1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms