Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 Z99916.2-201ENST00000604037 246 ntBASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 AC131212.4-201ENST00000623606 975 ntBASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 KRT16P1-201ENST00000399124 1418 ntBASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
ABCF3Q9NUQ8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ABCF3Q9NUQ8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ABCF3Q9NUQ8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.58
ABCF3Q9NUQ8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
ABCF3Q9NUQ8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 RPS2P55-201ENST00000397318 883 ntBASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 AC107956.1-201ENST00000494359 873 ntBASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 AC008550.1-201ENST00000511500 884 ntBASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 AC073195.1-201ENST00000607241 877 ntBASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 AP006294.2-201ENST00000641667 209 ntBASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.64■□□□□ 0.57
ABCF3Q9NUQ8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 KSR1P1-201ENST00000446298 240 ntBASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 CD177P1-201ENST00000606252 935 ntBASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
ABCF3Q9NUQ8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCF3Q9NUQ8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms