Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 MYC-208ENST00000641036 567 ntBASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 ESPNP-201ENST00000270691 2015 ntBASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 LTB4R2-202ENST00000528054 3092 ntBASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 CA15P1-201ENST00000481698 905 ntBASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.06■□□□□ 0.32
CTPS2Q9NRF8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 AL162741.1-201ENST00000565563 1558 ntBASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS2Q9NRF8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTPS2Q9NRF8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.04■□□□□ 0.32
CTPS2Q9NRF8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTPS2Q9NRF8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.04■□□□□ 0.32
CTPS2Q9NRF8 GPAT2P1-201ENST00000444924 1672 ntBASIC17.04■□□□□ 0.32
CTPS2Q9NRF8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.04■□□□□ 0.32
CTPS2Q9NRF8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTPS2Q9NRF8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms