Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 HEIH-201ENST00000623091 1652 ntBASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 PRORSD1P-202ENST00000563365 2154 ntBASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 AC117947.1-201ENST00000427448 529 ntBASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 AC139887.4-201ENST00000607877 719 ntBASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 AC083906.6-201ENST00000641366 219 ntBASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NECTIN3Q9NQS3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 COX11P1-201ENST00000489116 835 ntBASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 AL023973.1-201ENST00000624619 620 ntBASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
NECTIN3Q9NQS3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 MTMR9LP-203ENST00000426597 1545 ntBASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms