Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.19■□□□□ 0.5
SSU72Q9NP77 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.19■□□□□ 0.5
SSU72Q9NP77 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
SSU72Q9NP77 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.19■□□□□ 0.5
SSU72Q9NP77 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.19■□□□□ 0.5
SSU72Q9NP77 AC084018.2-201ENST00000613093 2607 ntBASIC18.19■□□□□ 0.5
SSU72Q9NP77 AC011298.2-201ENST00000617989 482 ntBASIC18.19■□□□□ 0.5
SSU72Q9NP77 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.19■□□□□ 0.5
SSU72Q9NP77 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSU72Q9NP77 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.19■□□□□ 0.5
SSU72Q9NP77 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SSU72Q9NP77 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
SSU72Q9NP77 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSU72Q9NP77 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.18■□□□□ 0.5
SSU72Q9NP77 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.18■□□□□ 0.5
SSU72Q9NP77 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.18■□□□□ 0.5
SSU72Q9NP77 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSU72Q9NP77 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.18■□□□□ 0.5
SSU72Q9NP77 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSU72Q9NP77 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSU72Q9NP77 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSU72Q9NP77 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSU72Q9NP77 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SSU72Q9NP77 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSU72Q9NP77 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.18■□□□□ 0.5
SSU72Q9NP77 AC239809.2-201ENST00000415381 517 ntBASIC18.18■□□□□ 0.5
SSU72Q9NP77 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SSU72Q9NP77 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSU72Q9NP77 AC130371.2-201ENST00000619443 611 ntBASIC18.18■□□□□ 0.5
SSU72Q9NP77 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.18■□□□□ 0.5
SSU72Q9NP77 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSU72Q9NP77 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSU72Q9NP77 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.18■□□□□ 0.5
SSU72Q9NP77 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
SSU72Q9NP77 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SSU72Q9NP77 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSU72Q9NP77 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SSU72Q9NP77 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSU72Q9NP77 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.18■□□□□ 0.5
SSU72Q9NP77 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.17■□□□□ 0.5
SSU72Q9NP77 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.17■□□□□ 0.5
SSU72Q9NP77 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.17■□□□□ 0.5
SSU72Q9NP77 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.17■□□□□ 0.5
SSU72Q9NP77 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SSU72Q9NP77 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.17■□□□□ 0.5
SSU72Q9NP77 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SSU72Q9NP77 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 FAM207BP-201ENST00000447172 505 ntBASIC18.17■□□□□ 0.5
SSU72Q9NP77 AC008040.2-201ENST00000461049 708 ntBASIC18.17■□□□□ 0.5
SSU72Q9NP77 AC133681.1-201ENST00000465482 601 ntBASIC18.17■□□□□ 0.5
SSU72Q9NP77 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.17■□□□□ 0.5
SSU72Q9NP77 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.17■□□□□ 0.5
SSU72Q9NP77 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
SSU72Q9NP77 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SSU72Q9NP77 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.17■□□□□ 0.5
SSU72Q9NP77 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SSU72Q9NP77 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SSU72Q9NP77 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
SSU72Q9NP77 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
SSU72Q9NP77 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSU72Q9NP77 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSU72Q9NP77 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSU72Q9NP77 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.16■□□□□ 0.5
SSU72Q9NP77 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSU72Q9NP77 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSU72Q9NP77 AC022211.2-201ENST00000585075 2527 ntBASIC18.16■□□□□ 0.5
SSU72Q9NP77 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.16■□□□□ 0.5
SSU72Q9NP77 AC133963.1-201ENST00000504166 1679 ntBASIC18.16■□□□□ 0.5
SSU72Q9NP77 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSU72Q9NP77 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSU72Q9NP77 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.16■□□□□ 0.5
SSU72Q9NP77 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSU72Q9NP77 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SSU72Q9NP77 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSU72Q9NP77 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
SSU72Q9NP77 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSU72Q9NP77 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SSU72Q9NP77 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSU72Q9NP77 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.16■□□□□ 0.5
SSU72Q9NP77 RPS2P4-201ENST00000476944 856 ntBASIC18.16■□□□□ 0.5
SSU72Q9NP77 AP003097.1-201ENST00000530657 1135 ntBASIC18.16■□□□□ 0.5
SSU72Q9NP77 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSU72Q9NP77 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSU72Q9NP77 AL023875.1-201ENST00000640777 796 ntBASIC18.16■□□□□ 0.5
SSU72Q9NP77 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms