Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC073210.2-201ENST00000430369 194 ntBASIC16.66■□□□□ 0.26
HMG20AQ9NP66 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 NCF1B-203ENST00000435988 1254 ntBASIC16.66■□□□□ 0.26
HMG20AQ9NP66 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 AP001094.4-201ENST00000579008 2176 ntBASIC16.65■□□□□ 0.26
HMG20AQ9NP66 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 PP12613-201ENST00000424958 2230 ntBASIC16.65■□□□□ 0.26
HMG20AQ9NP66 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 AC005829.2-201ENST00000571422 1056 ntBASIC16.65■□□□□ 0.26
HMG20AQ9NP66 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 AC018553.1-201ENST00000616682 1458 ntBASIC16.65■□□□□ 0.26
HMG20AQ9NP66 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.65■□□□□ 0.26
HMG20AQ9NP66 AL596257.1-201ENST00000641463 2694 ntBASIC16.64■□□□□ 0.26
HMG20AQ9NP66 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 PKD1P5-201ENST00000532415 10291 ntBASIC16.64■□□□□ 0.25
HMG20AQ9NP66 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 AC116351.2-201ENST00000606540 1585 ntBASIC16.64■□□□□ 0.25
HMG20AQ9NP66 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 GUSBP6-202ENST00000438529 1198 ntBASIC16.64■□□□□ 0.25
HMG20AQ9NP66 TSPY6P-201ENST00000448518 926 ntBASIC16.64■□□□□ 0.25
HMG20AQ9NP66 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 AC091874.3-201ENST00000512672 1195 ntBASIC16.64■□□□□ 0.25
HMG20AQ9NP66 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.64■□□□□ 0.25
HMG20AQ9NP66 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms