Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 RCN1P1-201ENST00000400413 996 ntBASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 TMPOP1-202ENST00000424642 1267 ntBASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 AL355075.4-201ENST00000554988 638 ntBASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 CR769767.2-201ENST00000622735 460 ntBASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEUROD4Q9HD90 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 MIR1238-201ENST00000408483 83 ntBASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 TSPY15P-201ENST00000457163 923 ntBASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 MIR3180-4-201ENST00000582223 153 ntBASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 AC012306.2-201ENST00000609350 630 ntBASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.3■□□□□ 0.36
NEUROD4Q9HD90 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 AC138028.4-201ENST00000564984 1845 ntBASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 TSPY14P-201ENST00000303979 915 ntBASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 AL390955.1-201ENST00000428694 934 ntBASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 AC007663.1-201ENST00000438948 1240 ntBASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.29■□□□□ 0.36
NEUROD4Q9HD90 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 SDHAP2-201ENST00000455183 2001 ntBASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms