Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 AL023803.3-201ENST00000615559 522 ntBASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 SDHAP2-201ENST00000455183 2001 ntBASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 OR6D1P-202ENST00000641007 5290 ntBASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 UNC93B2-201ENST00000285383 730 ntBASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 MIR149-201ENST00000384879 89 ntBASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 SLC25A1P2-201ENST00000430693 912 ntBASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 KRT18P23-201ENST00000435622 1283 ntBASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 TSPY17P-201ENST00000450329 467 ntBASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 AP003041.3-201ENST00000527151 707 ntBASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 GNAS-203ENST00000306120 1878 ntBASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 HOXB1-202ENST00000577092 1414 ntBASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 AC134043.2-201ENST00000624206 2238 ntBASIC17.62■□□□□ 0.41
LRTM1Q9HBL6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 RBM17P1-201ENST00000453646 1190 ntBASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 AL353719.1-201ENST00000566847 864 ntBASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 KRT8P7-201ENST00000533003 1432 ntBASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.61■□□□□ 0.41
LRTM1Q9HBL6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRTM1Q9HBL6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms