Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
ZFYVE1Q9HBF4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.34■□□□□ 0.53
ZFYVE1Q9HBF4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZFYVE1Q9HBF4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.34■□□□□ 0.53
ZFYVE1Q9HBF4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZFYVE1Q9HBF4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZFYVE1Q9HBF4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.33■□□□□ 0.53
ZFYVE1Q9HBF4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.33■□□□□ 0.53
ZFYVE1Q9HBF4 LINC01311-201ENST00000565162 1445 ntBASIC18.33■□□□□ 0.53
ZFYVE1Q9HBF4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZFYVE1Q9HBF4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.33■□□□□ 0.53
ZFYVE1Q9HBF4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZFYVE1Q9HBF4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZFYVE1Q9HBF4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZFYVE1Q9HBF4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
ZFYVE1Q9HBF4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 HBZP1-201ENST00000354915 429 ntBASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 MIR1224-201ENST00000408193 85 ntBASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 HLA-F-220ENST00000434407 884 ntBASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 AC010331.1-201ENST00000611423 582 ntBASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.33■□□□□ 0.52
ZFYVE1Q9HBF4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 ESPNP-201ENST00000270691 2015 ntBASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZFYVE1Q9HBF4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 AL024508.2-201ENST00000607749 1894 ntBASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.31■□□□□ 0.52
ZFYVE1Q9HBF4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ZFYVE1Q9HBF4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.3■□□□□ 0.52
ZFYVE1Q9HBF4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZFYVE1Q9HBF4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZFYVE1Q9HBF4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZFYVE1Q9HBF4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZFYVE1Q9HBF4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ZFYVE1Q9HBF4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZFYVE1Q9HBF4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZFYVE1Q9HBF4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZFYVE1Q9HBF4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZFYVE1Q9HBF4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms