Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
EFCC1Q9HA90 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
EFCC1Q9HA90 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.28■■□□□ 1
EFCC1Q9HA90 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.28■■□□□ 1
EFCC1Q9HA90 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.28■■□□□ 1
EFCC1Q9HA90 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.28■■□□□ 1
EFCC1Q9HA90 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EFCC1Q9HA90 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.28■■□□□ 1
EFCC1Q9HA90 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EFCC1Q9HA90 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
EFCC1Q9HA90 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.28■■□□□ 1
EFCC1Q9HA90 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.28■■□□□ 1
EFCC1Q9HA90 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.28■■□□□ 1
EFCC1Q9HA90 AC011840.4-201ENST00000578471 627 ntBASIC21.28■■□□□ 1
EFCC1Q9HA90 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.28■■□□□ 1
EFCC1Q9HA90 MIR5100-201ENST00000579544 119 ntBASIC21.28■■□□□ 1
EFCC1Q9HA90 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.28■■□□□ 1
EFCC1Q9HA90 AC008608.2-201ENST00000606089 416 ntBASIC21.28■■□□□ 1
EFCC1Q9HA90 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.28■■□□□ 1
EFCC1Q9HA90 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EFCC1Q9HA90 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EFCC1Q9HA90 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
EFCC1Q9HA90 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
EFCC1Q9HA90 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.28■■□□□ 1
EFCC1Q9HA90 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.28■■□□□ 1
EFCC1Q9HA90 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.28■■□□□ 1
EFCC1Q9HA90 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
EFCC1Q9HA90 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EFCC1Q9HA90 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.27■■□□□ 1
EFCC1Q9HA90 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.27■■□□□ 1
EFCC1Q9HA90 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
EFCC1Q9HA90 FEM1AP3-201ENST00000403722 1741 ntBASIC21.27■■□□□ 1
EFCC1Q9HA90 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.27■■□□□ 1
EFCC1Q9HA90 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EFCC1Q9HA90 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.27■■□□□ 1
EFCC1Q9HA90 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.27■■□□□ 1
EFCC1Q9HA90 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EFCC1Q9HA90 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
EFCC1Q9HA90 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.27■■□□□ 1
EFCC1Q9HA90 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.27■■□□□ 1
EFCC1Q9HA90 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.27■■□□□ 1
EFCC1Q9HA90 AC098831.1-202ENST00000438821 336 ntBASIC21.27■■□□□ 1
EFCC1Q9HA90 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.27■■□□□ 1
EFCC1Q9HA90 PGAM5P1-201ENST00000518923 814 ntBASIC21.27■■□□□ 1
EFCC1Q9HA90 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.27■■□□□ 1
EFCC1Q9HA90 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.27■■□□□ 1
EFCC1Q9HA90 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.27■■□□□ 1
EFCC1Q9HA90 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.27■■□□□ 1
EFCC1Q9HA90 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.27■■□□□ 1
EFCC1Q9HA90 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.27■■□□□ 1
EFCC1Q9HA90 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.27■■□□□ 1
EFCC1Q9HA90 AC125437.2-201ENST00000625180 2167 ntBASIC21.27■■□□□ 1
EFCC1Q9HA90 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
EFCC1Q9HA90 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.27■□□□□ 0.99
EFCC1Q9HA90 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 PCDHAC2-203ENST00000615316 3011 ntBASIC21.26■□□□□ 0.99
EFCC1Q9HA90 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 AC034236.2-201ENST00000606662 1610 ntBASIC21.26■□□□□ 0.99
EFCC1Q9HA90 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 FAM215A-202ENST00000632077 792 ntBASIC21.26■□□□□ 0.99
EFCC1Q9HA90 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EFCC1Q9HA90 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 UPF3AP3-201ENST00000420996 769 ntBASIC21.25■□□□□ 0.99
EFCC1Q9HA90 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 AP001160.2-201ENST00000596071 487 ntBASIC21.25■□□□□ 0.99
EFCC1Q9HA90 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms