Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 ECEL1P2-202ENST00000465689 757 ntBASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 LINC01568-207ENST00000641790 1380 ntBASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 AC009947.2-201ENST00000444014 672 ntBASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 AC099343.3-201ENST00000605834 2503 ntBASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC40Q9H9A6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 AC010240.3-201ENST00000607688 395 ntBASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC40Q9H9A6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC40Q9H9A6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.58■□□□□ 0.57
LRRC40Q9H9A6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
LRRC40Q9H9A6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC40Q9H9A6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.58■□□□□ 0.57
LRRC40Q9H9A6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.58■□□□□ 0.57
LRRC40Q9H9A6 PHGDH-209ENST00000641074 1780 ntBASIC18.58■□□□□ 0.57
LRRC40Q9H9A6 REXO1L9P-201ENST00000604264 2108 ntBASIC18.58■□□□□ 0.57
LRRC40Q9H9A6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.58■□□□□ 0.57
LRRC40Q9H9A6 KRT18P22-201ENST00000402024 1347 ntBASIC18.58■□□□□ 0.57
LRRC40Q9H9A6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.58■□□□□ 0.57
LRRC40Q9H9A6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC40Q9H9A6 AC008764.6-201ENST00000595909 2069 ntBASIC18.58■□□□□ 0.57
LRRC40Q9H9A6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 NEK4P2-201ENST00000580004 1012 ntBASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms