Protein–RNA interactions for Protein: Q9H7E2

TDRD3, Tudor domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3Q9H7E2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 AC073648.2-201ENST00000510116 352 ntBASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 AC139530.3-201ENST00000620344 690 ntBASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 FAM215A-202ENST00000632077 792 ntBASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TDRD3Q9H7E2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 RBM17P3-201ENST00000417687 1192 ntBASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 POLD2P1-201ENST00000511220 997 ntBASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 AC139887.3-201ENST00000568585 713 ntBASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TDRD3Q9H7E2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TDRD3Q9H7E2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.64■■□□□ 1.06
TDRD3Q9H7E2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TDRD3Q9H7E2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.64■■□□□ 1.06
TDRD3Q9H7E2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TDRD3Q9H7E2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
TDRD3Q9H7E2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
TDRD3Q9H7E2 RPL13AP23-201ENST00000480739 586 ntBASIC21.64■■□□□ 1.05
TDRD3Q9H7E2 KRT18P58-201ENST00000527480 1120 ntBASIC21.64■■□□□ 1.05
TDRD3Q9H7E2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TDRD3Q9H7E2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TDRD3Q9H7E2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.64■■□□□ 1.05
TDRD3Q9H7E2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TDRD3Q9H7E2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.64■■□□□ 1.05
TDRD3Q9H7E2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.64■■□□□ 1.05
TDRD3Q9H7E2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.64■■□□□ 1.05
TDRD3Q9H7E2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TDRD3Q9H7E2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TDRD3Q9H7E2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.64■■□□□ 1.05
TDRD3Q9H7E2 AC125634.1-201ENST00000438758 1403 ntBASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 AC005082.1-201ENST00000413042 2259 ntBASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 KRT18P13-201ENST00000400056 1290 ntBASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 SCARNA2-201ENST00000458748 420 ntBASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 AC011467.2-201ENST00000598425 242 ntBASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 AC116407.3-201ENST00000623905 1129 ntBASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TDRD3Q9H7E2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms