Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HIPK3Q9H422 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HIPK3Q9H422 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.96■□□□□ 0.79
HIPK3Q9H422 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.96■□□□□ 0.79
HIPK3Q9H422 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.96■□□□□ 0.79
HIPK3Q9H422 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HIPK3Q9H422 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
HIPK3Q9H422 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HIPK3Q9H422 AC098831.1-202ENST00000438821 336 ntBASIC19.96■□□□□ 0.79
HIPK3Q9H422 AL591424.1-201ENST00000442569 1213 ntBASIC19.96■□□□□ 0.79
HIPK3Q9H422 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.96■□□□□ 0.79
HIPK3Q9H422 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.96■□□□□ 0.79
HIPK3Q9H422 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.96■□□□□ 0.79
HIPK3Q9H422 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.96■□□□□ 0.79
HIPK3Q9H422 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
HIPK3Q9H422 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
HIPK3Q9H422 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
HIPK3Q9H422 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HIPK3Q9H422 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HIPK3Q9H422 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
HIPK3Q9H422 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HIPK3Q9H422 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HIPK3Q9H422 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HIPK3Q9H422 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HIPK3Q9H422 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HIPK3Q9H422 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HIPK3Q9H422 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 ABCD1P5-201ENST00000445663 754 ntBASIC19.95■□□□□ 0.78
HIPK3Q9H422 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 OR7E14P-202ENST00000530490 1290 ntBASIC19.95■□□□□ 0.78
HIPK3Q9H422 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 AC034105.1-201ENST00000563488 319 ntBASIC19.95■□□□□ 0.78
HIPK3Q9H422 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 AC010327.4-202ENST00000591484 748 ntBASIC19.95■□□□□ 0.78
HIPK3Q9H422 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HIPK3Q9H422 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HIPK3Q9H422 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HIPK3Q9H422 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.95■□□□□ 0.78
HIPK3Q9H422 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HIPK3Q9H422 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HIPK3Q9H422 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 AC099343.3-201ENST00000605834 2503 ntBASIC19.94■□□□□ 0.78
HIPK3Q9H422 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HIPK3Q9H422 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.94■□□□□ 0.78
HIPK3Q9H422 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.94■□□□□ 0.78
HIPK3Q9H422 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.94■□□□□ 0.78
HIPK3Q9H422 MTCL1P1-201ENST00000446207 792 ntBASIC19.94■□□□□ 0.78
HIPK3Q9H422 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.94■□□□□ 0.78
HIPK3Q9H422 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.94■□□□□ 0.78
HIPK3Q9H422 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.94■□□□□ 0.78
HIPK3Q9H422 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.94■□□□□ 0.78
HIPK3Q9H422 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.94■□□□□ 0.78
HIPK3Q9H422 AL139424.1-201ENST00000607572 797 ntBASIC19.94■□□□□ 0.78
HIPK3Q9H422 Z83851.2-201ENST00000609564 659 ntBASIC19.94■□□□□ 0.78
HIPK3Q9H422 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.94■□□□□ 0.78
HIPK3Q9H422 AC009154.2-201ENST00000621177 724 ntBASIC19.94■□□□□ 0.78
HIPK3Q9H422 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.94■□□□□ 0.78
HIPK3Q9H422 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.94■□□□□ 0.78
HIPK3Q9H422 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
HIPK3Q9H422 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK3Q9H422 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.94■□□□□ 0.78
HIPK3Q9H422 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK3Q9H422 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HIPK3Q9H422 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HIPK3Q9H422 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK3Q9H422 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK3Q9H422 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
HIPK3Q9H422 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HIPK3Q9H422 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK3Q9H422 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK3Q9H422 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK3Q9H422 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms