Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.78■□□□□ 0.76
CDT1Q9H211 GUSBP12-201ENST00000513727 720 ntBASIC19.78■□□□□ 0.76
CDT1Q9H211 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CDT1Q9H211 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 CLEC4GP1-201ENST00000596555 870 ntBASIC19.78■□□□□ 0.76
CDT1Q9H211 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.78■□□□□ 0.76
CDT1Q9H211 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 AC124864.1-201ENST00000623408 392 ntBASIC19.78■□□□□ 0.76
CDT1Q9H211 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDT1Q9H211 LINC00602-201ENST00000629776 2065 ntBASIC19.78■□□□□ 0.76
CDT1Q9H211 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.78■□□□□ 0.76
CDT1Q9H211 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
CDT1Q9H211 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.78■□□□□ 0.76
CDT1Q9H211 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDT1Q9H211 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.77■□□□□ 0.76
CDT1Q9H211 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDT1Q9H211 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDT1Q9H211 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDT1Q9H211 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDT1Q9H211 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDT1Q9H211 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDT1Q9H211 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDT1Q9H211 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CDT1Q9H211 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDT1Q9H211 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDT1Q9H211 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDT1Q9H211 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.77■□□□□ 0.76
CDT1Q9H211 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.77■□□□□ 0.76
CDT1Q9H211 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.77■□□□□ 0.76
CDT1Q9H211 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.77■□□□□ 0.76
CDT1Q9H211 LINC00265-3P-201ENST00000447588 903 ntBASIC19.77■□□□□ 0.76
CDT1Q9H211 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDT1Q9H211 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.77■□□□□ 0.76
CDT1Q9H211 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.77■□□□□ 0.76
CDT1Q9H211 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.77■□□□□ 0.76
CDT1Q9H211 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDT1Q9H211 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDT1Q9H211 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDT1Q9H211 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDT1Q9H211 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDT1Q9H211 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDT1Q9H211 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.77■□□□□ 0.75
CDT1Q9H211 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDT1Q9H211 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
CDT1Q9H211 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDT1Q9H211 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDT1Q9H211 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDT1Q9H211 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CDT1Q9H211 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CDT1Q9H211 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.76■□□□□ 0.75
CDT1Q9H211 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDT1Q9H211 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.76■□□□□ 0.75
CDT1Q9H211 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDT1Q9H211 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDT1Q9H211 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDT1Q9H211 AL845331.1-201ENST00000424978 1190 ntBASIC19.76■□□□□ 0.75
CDT1Q9H211 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.76■□□□□ 0.75
CDT1Q9H211 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDT1Q9H211 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.76■□□□□ 0.75
CDT1Q9H211 AC012313.10-201ENST00000623509 926 ntBASIC19.76■□□□□ 0.75
CDT1Q9H211 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.76■□□□□ 0.75
CDT1Q9H211 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDT1Q9H211 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CDT1Q9H211 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDT1Q9H211 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDT1Q9H211 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CDT1Q9H211 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDT1Q9H211 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDT1Q9H211 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDT1Q9H211 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDT1Q9H211 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDT1Q9H211 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDT1Q9H211 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.75■□□□□ 0.75
CDT1Q9H211 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.75■□□□□ 0.75
CDT1Q9H211 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CDT1Q9H211 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDT1Q9H211 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDT1Q9H211 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDT1Q9H211 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CDT1Q9H211 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDT1Q9H211 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDT1Q9H211 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.75■□□□□ 0.75
CDT1Q9H211 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDT1Q9H211 TSPY12P-201ENST00000421279 868 ntBASIC19.75■□□□□ 0.75
CDT1Q9H211 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDT1Q9H211 DUSP5P1-201ENST00000441325 1139 ntBASIC19.75■□□□□ 0.75
CDT1Q9H211 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDT1Q9H211 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.75■□□□□ 0.75
CDT1Q9H211 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.75■□□□□ 0.75
CDT1Q9H211 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CDT1Q9H211 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.75■□□□□ 0.75
CDT1Q9H211 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CDT1Q9H211 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms