Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 HYMAI.1-201ENST00000620949 238 ntBASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
CCM2Q9BSQ5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.02■□□□□ 0.47
CCM2Q9BSQ5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCM2Q9BSQ5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCM2Q9BSQ5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCM2Q9BSQ5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCM2Q9BSQ5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCM2Q9BSQ5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCM2Q9BSQ5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.02■□□□□ 0.47
CCM2Q9BSQ5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCM2Q9BSQ5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 HBZP1-201ENST00000354915 429 ntBASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 AC104581.1-202ENST00000635932 2618 ntBASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCM2Q9BSQ5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2Q9BSQ5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
CCM2Q9BSQ5 AC009113.1-201ENST00000570267 2443 ntBASIC18■□□□□ 0.47
CCM2Q9BSQ5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2Q9BSQ5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2Q9BSQ5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2Q9BSQ5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCM2Q9BSQ5 AL031133.1-201ENST00000406807 723 ntBASIC18■□□□□ 0.47
CCM2Q9BSQ5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18■□□□□ 0.47
CCM2Q9BSQ5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCM2Q9BSQ5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18■□□□□ 0.47
CCM2Q9BSQ5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18■□□□□ 0.47
CCM2Q9BSQ5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18■□□□□ 0.47
CCM2Q9BSQ5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CCM2Q9BSQ5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18■□□□□ 0.47
CCM2Q9BSQ5 AL121956.5-201ENST00000625261 221 ntBASIC18■□□□□ 0.47
CCM2Q9BSQ5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18■□□□□ 0.47
CCM2Q9BSQ5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18■□□□□ 0.47
CCM2Q9BSQ5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18■□□□□ 0.47
CCM2Q9BSQ5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CCM2Q9BSQ5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2Q9BSQ5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2Q9BSQ5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2Q9BSQ5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18■□□□□ 0.47
CCM2Q9BSQ5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
CCM2Q9BSQ5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 HCG11-201ENST00000411553 5696 ntBASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 ZNF444P1-201ENST00000559497 298 ntBASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 AL024508.2-201ENST00000607749 1894 ntBASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2Q9BSQ5 AC026471.1-201ENST00000564629 3026 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms