Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 LINC01568-207ENST00000641790 1380 ntBASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 AC091390.4-202ENST00000476426 537 ntBASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1CQ9BQE3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 FAM207BP-201ENST00000447172 505 ntBASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 AL645608.8-201ENST00000606034 2086 ntBASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1CQ9BQE3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBA1CQ9BQE3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
TUBA1CQ9BQE3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms