Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.84■□□□□ 0.45
PKP4Q99569 AC135050.7-201ENST00000624508 2218 ntBASIC17.84■□□□□ 0.45
PKP4Q99569 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PKP4Q99569 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PKP4Q99569 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.84■□□□□ 0.45
PKP4Q99569 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PKP4Q99569 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PKP4Q99569 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PKP4Q99569 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PKP4Q99569 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PKP4Q99569 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PKP4Q99569 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PKP4Q99569 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PKP4Q99569 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.83■□□□□ 0.44
PKP4Q99569 SPDYE15P-201ENST00000424157 909 ntBASIC17.83■□□□□ 0.44
PKP4Q99569 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.83■□□□□ 0.44
PKP4Q99569 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.83■□□□□ 0.44
PKP4Q99569 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.83■□□□□ 0.44
PKP4Q99569 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.83■□□□□ 0.44
PKP4Q99569 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PKP4Q99569 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.83■□□□□ 0.44
PKP4Q99569 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PKP4Q99569 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PKP4Q99569 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PKP4Q99569 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.83■□□□□ 0.44
PKP4Q99569 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PKP4Q99569 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.83■□□□□ 0.44
PKP4Q99569 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
PKP4Q99569 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PKP4Q99569 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PKP4Q99569 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PKP4Q99569 AL162741.1-201ENST00000565563 1558 ntBASIC17.83■□□□□ 0.44
PKP4Q99569 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PKP4Q99569 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PKP4Q99569 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PKP4Q99569 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PKP4Q99569 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PKP4Q99569 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PKP4Q99569 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PKP4Q99569 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PKP4Q99569 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PKP4Q99569 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.82■□□□□ 0.44
PKP4Q99569 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
PKP4Q99569 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PKP4Q99569 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PKP4Q99569 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PKP4Q99569 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PKP4Q99569 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PKP4Q99569 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PKP4Q99569 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.82■□□□□ 0.44
PKP4Q99569 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.82■□□□□ 0.44
PKP4Q99569 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.82■□□□□ 0.44
PKP4Q99569 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
PKP4Q99569 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PKP4Q99569 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PKP4Q99569 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PKP4Q99569 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PKP4Q99569 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PKP4Q99569 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.82■□□□□ 0.44
PKP4Q99569 AC093677.2-201ENST00000600169 1863 ntBASIC17.82■□□□□ 0.44
PKP4Q99569 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PKP4Q99569 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.82■□□□□ 0.44
PKP4Q99569 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PKP4Q99569 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.82■□□□□ 0.44
PKP4Q99569 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.81■□□□□ 0.44
PKP4Q99569 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
PKP4Q99569 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PKP4Q99569 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.81■□□□□ 0.44
PKP4Q99569 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP4Q99569 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PKP4Q99569 LINC01126-201ENST00000623515 1646 ntBASIC17.81■□□□□ 0.44
PKP4Q99569 AC007613.1-201ENST00000572811 2597 ntBASIC17.81■□□□□ 0.44
PKP4Q99569 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PKP4Q99569 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PKP4Q99569 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP4Q99569 STARP1-201ENST00000397973 869 ntBASIC17.81■□□□□ 0.44
PKP4Q99569 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
PKP4Q99569 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP4Q99569 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PKP4Q99569 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.81■□□□□ 0.44
PKP4Q99569 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.81■□□□□ 0.44
PKP4Q99569 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP4Q99569 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP4Q99569 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PKP4Q99569 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PKP4Q99569 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PKP4Q99569 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP4Q99569 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP4Q99569 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.81■□□□□ 0.44
PKP4Q99569 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP4Q99569 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.81■□□□□ 0.44
PKP4Q99569 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.81■□□□□ 0.44
PKP4Q99569 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.81■□□□□ 0.44
PKP4Q99569 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP4Q99569 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.81■□□□□ 0.44
PKP4Q99569 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms