Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC079776.4-201ENST00000511039 504 ntBASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 AF238378.1-201ENST00000526806 358 ntBASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SYNGAP1Q96PV0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.77■□□□□ 0.91
SYNGAP1Q96PV0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
SYNGAP1Q96PV0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SYNGAP1Q96PV0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SYNGAP1Q96PV0 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.77■□□□□ 0.91
SYNGAP1Q96PV0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.77■□□□□ 0.91
SYNGAP1Q96PV0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SYNGAP1Q96PV0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.77■□□□□ 0.91
SYNGAP1Q96PV0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.77■□□□□ 0.91
SYNGAP1Q96PV0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SYNGAP1Q96PV0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.77■□□□□ 0.91
SYNGAP1Q96PV0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SYNGAP1Q96PV0 AC064862.7-201ENST00000604520 867 ntBASIC20.77■□□□□ 0.91
SYNGAP1Q96PV0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SYNGAP1Q96PV0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 AC113404.2-201ENST00000507884 177 ntBASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 AC008687.5-201ENST00000593746 558 ntBASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 BNIP3P18-201ENST00000593976 575 ntBASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 BX640515.1-201ENST00000617215 977 ntBASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.76■□□□□ 0.91
SYNGAP1Q96PV0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNGAP1Q96PV0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SYNGAP1Q96PV0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNGAP1Q96PV0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNGAP1Q96PV0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNGAP1Q96PV0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SYNGAP1Q96PV0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNGAP1Q96PV0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms