Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 DPP3P2-201ENST00000416030 1696 ntBASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 AL162377.1-201ENST00000618844 1793 ntBASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.46■□□□□ 0.39
CNTNAP3BQ96NU0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 AC009947.1-201ENST00000444350 727 ntBASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 AC004449.1-201ENST00000564240 433 ntBASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.45■□□□□ 0.38
CNTNAP3BQ96NU0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 AP002414.3-201ENST00000589352 1468 ntBASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 GABARAPL3-202ENST00000624044 1851 ntBASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 MRPL20P1-201ENST00000400819 433 ntBASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 AC087641.1-201ENST00000557561 1021 ntBASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms