Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 RPS2P55-201ENST00000397318 883 ntBASIC13.28□□□□□ -0.28
C9orf85Q96MD7 CRYGFP-201ENST00000418459 633 ntBASIC13.28□□□□□ -0.28
C9orf85Q96MD7 AC012618.2-201ENST00000428058 849 ntBASIC13.28□□□□□ -0.28
C9orf85Q96MD7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 AC107956.1-201ENST00000494359 873 ntBASIC13.28□□□□□ -0.28
C9orf85Q96MD7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 AP005242.2-201ENST00000580065 1175 ntBASIC13.28□□□□□ -0.28
C9orf85Q96MD7 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.28□□□□□ -0.28
C9orf85Q96MD7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 REXO1L10P-201ENST00000615707 1290 ntBASIC13.28□□□□□ -0.28
C9orf85Q96MD7 REXO1L12P-201ENST00000622156 912 ntBASIC13.28□□□□□ -0.28
C9orf85Q96MD7 AC113410.3-201ENST00000623366 203 ntBASIC13.28□□□□□ -0.28
C9orf85Q96MD7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 AC093010.1-201ENST00000473625 1624 ntBASIC13.28□□□□□ -0.28
C9orf85Q96MD7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C9orf85Q96MD7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
C9orf85Q96MD7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
C9orf85Q96MD7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
C9orf85Q96MD7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
C9orf85Q96MD7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
C9orf85Q96MD7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
C9orf85Q96MD7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
C9orf85Q96MD7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
C9orf85Q96MD7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
C9orf85Q96MD7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
C9orf85Q96MD7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
C9orf85Q96MD7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
C9orf85Q96MD7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
C9orf85Q96MD7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
C9orf85Q96MD7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 KRT18P23-201ENST00000435622 1283 ntBASIC13.27□□□□□ -0.29
C9orf85Q96MD7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 AC233702.5-201ENST00000584107 538 ntBASIC13.27□□□□□ -0.29
C9orf85Q96MD7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C9orf85Q96MD7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
C9orf85Q96MD7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
C9orf85Q96MD7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C9orf85Q96MD7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C9orf85Q96MD7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C9orf85Q96MD7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C9orf85Q96MD7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C9orf85Q96MD7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C9orf85Q96MD7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C9orf85Q96MD7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms