Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN23Q96B33 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN23Q96B33 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDN23Q96B33 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CLDN23Q96B33 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN23Q96B33 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN23Q96B33 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN23Q96B33 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN23Q96B33 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN23Q96B33 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN23Q96B33 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN23Q96B33 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CLDN23Q96B33 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN23Q96B33 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN23Q96B33 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN23Q96B33 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.22■□□□□ 0.51
CLDN23Q96B33 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN23Q96B33 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN23Q96B33 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLDN23Q96B33 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLDN23Q96B33 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN23Q96B33 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CLDN23Q96B33 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN23Q96B33 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN23Q96B33 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN23Q96B33 KRT18P28-201ENST00000453838 1332 ntBASIC18.22■□□□□ 0.51
CLDN23Q96B33 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLDN23Q96B33 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN23Q96B33 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLDN23Q96B33 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN23Q96B33 LINC00602-201ENST00000629776 2065 ntBASIC18.21■□□□□ 0.51
CLDN23Q96B33 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN23Q96B33 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN23Q96B33 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN23Q96B33 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN23Q96B33 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN23Q96B33 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN23Q96B33 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN23Q96B33 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN23Q96B33 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN23Q96B33 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLDN23Q96B33 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN23Q96B33 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN23Q96B33 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.21■□□□□ 0.51
CLDN23Q96B33 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN23Q96B33 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.21■□□□□ 0.51
CLDN23Q96B33 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN23Q96B33 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.21■□□□□ 0.51
CLDN23Q96B33 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.21■□□□□ 0.51
CLDN23Q96B33 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.21■□□□□ 0.51
CLDN23Q96B33 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN23Q96B33 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN23Q96B33 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN23Q96B33 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN23Q96B33 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.21■□□□□ 0.51
CLDN23Q96B33 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN23Q96B33 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN23Q96B33 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN23Q96B33 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CLDN23Q96B33 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLDN23Q96B33 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN23Q96B33 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN23Q96B33 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CLDN23Q96B33 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN23Q96B33 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
CLDN23Q96B33 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN23Q96B33 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.2■□□□□ 0.5
CLDN23Q96B33 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN23Q96B33 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN23Q96B33 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.2■□□□□ 0.5
CLDN23Q96B33 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.2■□□□□ 0.5
CLDN23Q96B33 MCCD1P2-201ENST00000423228 335 ntBASIC18.2■□□□□ 0.5
CLDN23Q96B33 KRT18P27-201ENST00000427733 1299 ntBASIC18.2■□□□□ 0.5
CLDN23Q96B33 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN23Q96B33 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.2■□□□□ 0.5
CLDN23Q96B33 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN23Q96B33 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.2■□□□□ 0.5
CLDN23Q96B33 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN23Q96B33 PGM5P2-202ENST00000637225 1043 ntBASIC18.2■□□□□ 0.5
CLDN23Q96B33 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
CLDN23Q96B33 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN23Q96B33 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN23Q96B33 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
CLDN23Q96B33 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN23Q96B33 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN23Q96B33 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN23Q96B33 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN23Q96B33 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN23Q96B33 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN23Q96B33 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN23Q96B33 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN23Q96B33 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CLDN23Q96B33 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.19■□□□□ 0.5
CLDN23Q96B33 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.19■□□□□ 0.5
CLDN23Q96B33 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CLDN23Q96B33 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.19■□□□□ 0.5
CLDN23Q96B33 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN23Q96B33 MIR3197-201ENST00000582241 73 ntBASIC18.19■□□□□ 0.5
CLDN23Q96B33 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.19■□□□□ 0.5
CLDN23Q96B33 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms