Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 AL158047.1-201ENST00000445918 881 ntBASIC20.65■□□□□ 0.9
SMARCE1Q969G3 UBE2SP1-201ENST00000450587 669 ntBASIC20.65■□□□□ 0.9
SMARCE1Q969G3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 AP001412.1-201ENST00000608405 714 ntBASIC20.65■□□□□ 0.9
SMARCE1Q969G3 REXO1L10P-201ENST00000615707 1290 ntBASIC20.65■□□□□ 0.9
SMARCE1Q969G3 REXO1L12P-201ENST00000622156 912 ntBASIC20.65■□□□□ 0.9
SMARCE1Q969G3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMARCE1Q969G3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.64■□□□□ 0.9
SMARCE1Q969G3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
SMARCE1Q969G3 GMCL1P1-201ENST00000463439 1581 ntBASIC20.64■□□□□ 0.9
SMARCE1Q969G3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.64■□□□□ 0.9
SMARCE1Q969G3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMARCE1Q969G3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 CRYGFP-201ENST00000418459 633 ntBASIC20.64■□□□□ 0.89
SMARCE1Q969G3 AC012618.2-201ENST00000428058 849 ntBASIC20.64■□□□□ 0.89
SMARCE1Q969G3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 MIR3180-5-201ENST00000583743 153 ntBASIC20.64■□□□□ 0.89
SMARCE1Q969G3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCE1Q969G3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 GCSHP5-201ENST00000443090 522 ntBASIC20.63■□□□□ 0.89
SMARCE1Q969G3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 AC233702.5-201ENST00000584107 538 ntBASIC20.63■□□□□ 0.89
SMARCE1Q969G3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 AL049637.2-201ENST00000641778 930 ntBASIC20.63■□□□□ 0.89
SMARCE1Q969G3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCE1Q969G3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCE1Q969G3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.62■□□□□ 0.89
SMARCE1Q969G3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SMARCE1Q969G3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCE1Q969G3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.62■□□□□ 0.89
SMARCE1Q969G3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SMARCE1Q969G3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SMARCE1Q969G3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCE1Q969G3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCE1Q969G3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCE1Q969G3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms