Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.76■□□□□ 0.27
HPS1Q92902 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPS1Q92902 AL049637.2-201ENST00000641778 930 ntBASIC16.76■□□□□ 0.27
HPS1Q92902 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPS1Q92902 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPS1Q92902 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPS1Q92902 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPS1Q92902 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPS1Q92902 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPS1Q92902 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HPS1Q92902 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPS1Q92902 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HPS1Q92902 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.76■□□□□ 0.27
HPS1Q92902 AL645608.8-201ENST00000606034 2086 ntBASIC16.76■□□□□ 0.27
HPS1Q92902 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.76■□□□□ 0.27
HPS1Q92902 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPS1Q92902 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPS1Q92902 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.76■□□□□ 0.27
HPS1Q92902 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.75■□□□□ 0.27
HPS1Q92902 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS1Q92902 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS1Q92902 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS1Q92902 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.75■□□□□ 0.27
HPS1Q92902 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.75■□□□□ 0.27
HPS1Q92902 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS1Q92902 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
HPS1Q92902 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS1Q92902 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.75■□□□□ 0.27
HPS1Q92902 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS1Q92902 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS1Q92902 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS1Q92902 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HPS1Q92902 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS1Q92902 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HPS1Q92902 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HPS1Q92902 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.75■□□□□ 0.27
HPS1Q92902 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HPS1Q92902 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.75■□□□□ 0.27
HPS1Q92902 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HPS1Q92902 MIR4785-201ENST00000585005 73 ntBASIC16.75■□□□□ 0.27
HPS1Q92902 AL121829.2-201ENST00000620908 328 ntBASIC16.75■□□□□ 0.27
HPS1Q92902 REXO1L12P-201ENST00000622156 912 ntBASIC16.75■□□□□ 0.27
HPS1Q92902 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS1Q92902 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
HPS1Q92902 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.75■□□□□ 0.27
HPS1Q92902 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS1Q92902 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.75■□□□□ 0.27
HPS1Q92902 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HPS1Q92902 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HPS1Q92902 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS1Q92902 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.74■□□□□ 0.27
HPS1Q92902 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 PHGDH-210ENST00000641115 1638 ntBASIC16.74■□□□□ 0.27
HPS1Q92902 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.74■□□□□ 0.27
HPS1Q92902 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
HPS1Q92902 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.74■□□□□ 0.27
HPS1Q92902 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.74■□□□□ 0.27
HPS1Q92902 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
HPS1Q92902 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HPS1Q92902 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.74■□□□□ 0.27
HPS1Q92902 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
HPS1Q92902 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.74■□□□□ 0.27
HPS1Q92902 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.74■□□□□ 0.27
HPS1Q92902 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.74■□□□□ 0.27
HPS1Q92902 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.74■□□□□ 0.27
HPS1Q92902 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.74■□□□□ 0.27
HPS1Q92902 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.74■□□□□ 0.27
HPS1Q92902 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.74■□□□□ 0.27
HPS1Q92902 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.74■□□□□ 0.27
HPS1Q92902 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.74■□□□□ 0.27
HPS1Q92902 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.74■□□□□ 0.27
HPS1Q92902 NKILA-202ENST00000614771 2598 ntBASIC16.74■□□□□ 0.27
HPS1Q92902 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS1Q92902 AC011676.5-201ENST00000624864 2660 ntBASIC16.73■□□□□ 0.27
HPS1Q92902 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.73■□□□□ 0.27
HPS1Q92902 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms