Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
RPGRQ92834 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC22.52■■□□□ 1.2
RPGRQ92834 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRQ92834 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC22.52■■□□□ 1.2
RPGRQ92834 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC22.52■■□□□ 1.2
RPGRQ92834 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC22.52■■□□□ 1.2
RPGRQ92834 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
RPGRQ92834 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RPGRQ92834 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRQ92834 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC22.52■■□□□ 1.2
RPGRQ92834 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RPGRQ92834 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRQ92834 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRQ92834 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RPGRQ92834 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRQ92834 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.52■■□□□ 1.19
RPGRQ92834 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RPGRQ92834 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
RPGRQ92834 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
RPGRQ92834 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRQ92834 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.51■■□□□ 1.19
RPGRQ92834 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.51■■□□□ 1.19
RPGRQ92834 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
RPGRQ92834 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRQ92834 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRQ92834 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRQ92834 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRQ92834 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.51■■□□□ 1.19
RPGRQ92834 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.51■■□□□ 1.19
RPGRQ92834 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRQ92834 FUOM-202ENST00000368551 628 ntTSL 3 BASIC22.51■■□□□ 1.19
RPGRQ92834 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
RPGRQ92834 BX842568.4-201ENST00000421222 227 ntBASIC22.51■■□□□ 1.19
RPGRQ92834 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RPGRQ92834 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.51■■□□□ 1.19
RPGRQ92834 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.51■■□□□ 1.19
RPGRQ92834 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.51■■□□□ 1.19
RPGRQ92834 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.51■■□□□ 1.19
RPGRQ92834 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRQ92834 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRQ92834 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRQ92834 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRQ92834 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRQ92834 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
RPGRQ92834 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRQ92834 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRQ92834 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RPGRQ92834 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRQ92834 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRQ92834 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRQ92834 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.5■■□□□ 1.19
RPGRQ92834 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.5■■□□□ 1.19
RPGRQ92834 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRQ92834 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC22.5■■□□□ 1.19
RPGRQ92834 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RPGRQ92834 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC22.5■■□□□ 1.19
RPGRQ92834 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC22.5■■□□□ 1.19
RPGRQ92834 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC22.5■■□□□ 1.19
RPGRQ92834 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC22.5■■□□□ 1.19
RPGRQ92834 AC011467.2-201ENST00000598425 242 ntBASIC22.5■■□□□ 1.19
RPGRQ92834 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC22.5■■□□□ 1.19
RPGRQ92834 CAND2-206ENST00000626378 333 ntTSL 5 BASIC22.5■■□□□ 1.19
RPGRQ92834 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRQ92834 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RPGRQ92834 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RPGRQ92834 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRQ92834 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRQ92834 LINC00602-201ENST00000629776 2065 ntBASIC22.5■■□□□ 1.19
RPGRQ92834 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC22.49■■□□□ 1.19
RPGRQ92834 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
RPGRQ92834 AC125634.1-201ENST00000438758 1403 ntBASIC22.49■■□□□ 1.19
RPGRQ92834 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC22.49■■□□□ 1.19
RPGRQ92834 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRQ92834 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRQ92834 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRQ92834 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRQ92834 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRQ92834 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.49■■□□□ 1.19
RPGRQ92834 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRQ92834 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
RPGRQ92834 AL049812.1-201ENST00000432563 2267 ntBASIC22.49■■□□□ 1.19
RPGRQ92834 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
RPGRQ92834 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
RPGRQ92834 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRQ92834 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC22.49■■□□□ 1.19
RPGRQ92834 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRQ92834 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRQ92834 COX10-202ENST00000429152 875 ntTSL 2 BASIC22.49■■□□□ 1.19
RPGRQ92834 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC22.49■■□□□ 1.19
RPGRQ92834 AC021087.4-201ENST00000563761 564 ntBASIC22.49■■□□□ 1.19
RPGRQ92834 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC22.49■■□□□ 1.19
RPGRQ92834 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RPGRQ92834 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRQ92834 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
RPGRQ92834 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.49■■□□□ 1.19
RPGRQ92834 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRQ92834 AP005117.1-201ENST00000584346 1413 ntBASIC22.48■■□□□ 1.19
RPGRQ92834 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
RPGRQ92834 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RPGRQ92834 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms