Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.95■■□□□ 1.43
RAPGEF4Q8WZA2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RAPGEF4Q8WZA2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RAPGEF4Q8WZA2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RAPGEF4Q8WZA2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RAPGEF4Q8WZA2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RAPGEF4Q8WZA2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
RAPGEF4Q8WZA2 HNRNPDP1-201ENST00000439535 754 ntBASIC23.95■■□□□ 1.42
RAPGEF4Q8WZA2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.95■■□□□ 1.42
RAPGEF4Q8WZA2 AC011467.2-201ENST00000598425 242 ntBASIC23.95■■□□□ 1.42
RAPGEF4Q8WZA2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC23.95■■□□□ 1.42
RAPGEF4Q8WZA2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.95■■□□□ 1.42
RAPGEF4Q8WZA2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RAPGEF4Q8WZA2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RAPGEF4Q8WZA2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RAPGEF4Q8WZA2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 AC125634.1-201ENST00000438758 1403 ntBASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 RPL13AP23-201ENST00000480739 586 ntBASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 POLD2P1-201ENST00000511220 997 ntBASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC23.94■■□□□ 1.42
RAPGEF4Q8WZA2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RAPGEF4Q8WZA2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 RPS2P28-201ENST00000314255 741 ntBASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF4Q8WZA2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
RAPGEF4Q8WZA2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.91■■□□□ 1.42
RAPGEF4Q8WZA2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.91■■□□□ 1.42
RAPGEF4Q8WZA2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RAPGEF4Q8WZA2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RAPGEF4Q8WZA2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RAPGEF4Q8WZA2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC23.91■■□□□ 1.42
RAPGEF4Q8WZA2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC23.91■■□□□ 1.42
RAPGEF4Q8WZA2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC23.91■■□□□ 1.42
RAPGEF4Q8WZA2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
RAPGEF4Q8WZA2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RAPGEF4Q8WZA2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RAPGEF4Q8WZA2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms