Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 AC090340.1-201ENST00000620778 4980 ntBASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 DGCR10-201ENST00000609839 495 ntBASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC44A1Q8WWI5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 FAM197Y1-201ENST00000421178 764 ntBASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 FAM201B-201ENST00000458407 597 ntBASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 CA15P1-201ENST00000481698 905 ntBASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 PP12613-201ENST00000424958 2230 ntBASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC44A1Q8WWI5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 AC108860.2-201ENST00000562760 2183 ntBASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 MIR4674-201ENST00000582457 87 ntBASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms