Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 MIR149-201ENST00000384879 89 ntBASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 GCSHP5-201ENST00000443090 522 ntBASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 C1QBPP2-201ENST00000528754 825 ntBASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 MIR6786-201ENST00000616843 113 ntBASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 AC098590.1-201ENST00000468126 897 ntBASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 AC009102.3-201ENST00000623118 1491 ntBASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4Y2Q8TD47 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 AC036111.1-201ENST00000533973 1582 ntBASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 CR392000.1-201ENST00000624770 1228 ntBASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 AP006294.2-201ENST00000641667 209 ntBASIC16.02■□□□□ 0.16
RPS4Y2Q8TD47 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPS4Y2Q8TD47 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.01■□□□□ 0.15
RPS4Y2Q8TD47 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPS4Y2Q8TD47 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RPS4Y2Q8TD47 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.01■□□□□ 0.15
RPS4Y2Q8TD47 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPS4Y2Q8TD47 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RPS4Y2Q8TD47 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
RPS4Y2Q8TD47 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
RPS4Y2Q8TD47 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms