Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CHD6Q8TD26 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHD6Q8TD26 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.39■□□□□ 0.21
CHD6Q8TD26 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHD6Q8TD26 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.39■□□□□ 0.21
CHD6Q8TD26 REXO1L3P-201ENST00000622202 1288 ntBASIC16.39■□□□□ 0.21
CHD6Q8TD26 LINC01521-201ENST00000504184 1943 ntBASIC16.38■□□□□ 0.21
CHD6Q8TD26 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.38■□□□□ 0.21
CHD6Q8TD26 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 BCAR1-209ENST00000546196 1340 ntBASIC16.38■□□□□ 0.21
CHD6Q8TD26 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.38■□□□□ 0.21
CHD6Q8TD26 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.38■□□□□ 0.21
CHD6Q8TD26 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CHD6Q8TD26 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 AC034236.2-201ENST00000606662 1610 ntBASIC16.38■□□□□ 0.21
CHD6Q8TD26 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.38■□□□□ 0.21
CHD6Q8TD26 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.38■□□□□ 0.21
CHD6Q8TD26 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CHD6Q8TD26 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.38■□□□□ 0.21
CHD6Q8TD26 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.38■□□□□ 0.21
CHD6Q8TD26 AC068137.2-201ENST00000605408 478 ntBASIC16.38■□□□□ 0.21
CHD6Q8TD26 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CHD6Q8TD26 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD6Q8TD26 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.38■□□□□ 0.21
CHD6Q8TD26 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD6Q8TD26 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.37■□□□□ 0.21
CHD6Q8TD26 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.37■□□□□ 0.21
CHD6Q8TD26 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHD6Q8TD26 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD6Q8TD26 KRT18P32-201ENST00000424695 1287 ntBASIC16.37■□□□□ 0.21
CHD6Q8TD26 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.37■□□□□ 0.21
CHD6Q8TD26 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.37■□□□□ 0.21
CHD6Q8TD26 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.37■□□□□ 0.21
CHD6Q8TD26 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.37■□□□□ 0.21
CHD6Q8TD26 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CHD6Q8TD26 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD6Q8TD26 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD6Q8TD26 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHD6Q8TD26 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHD6Q8TD26 AC025580.3-201ENST00000617932 1424 ntBASIC16.37■□□□□ 0.21
CHD6Q8TD26 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD6Q8TD26 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHD6Q8TD26 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.37■□□□□ 0.21
CHD6Q8TD26 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHD6Q8TD26 AC069335.1-201ENST00000489972 472 ntBASIC16.37■□□□□ 0.21
CHD6Q8TD26 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.37■□□□□ 0.21
CHD6Q8TD26 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD6Q8TD26 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CHD6Q8TD26 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHD6Q8TD26 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.37■□□□□ 0.21
CHD6Q8TD26 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.37■□□□□ 0.21
CHD6Q8TD26 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD6Q8TD26 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD6Q8TD26 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.37■□□□□ 0.21
CHD6Q8TD26 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD6Q8TD26 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD6Q8TD26 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD6Q8TD26 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD6Q8TD26 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD6Q8TD26 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHD6Q8TD26 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 AC079776.2-201ENST00000641154 1609 ntBASIC16.36■□□□□ 0.21
CHD6Q8TD26 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD6Q8TD26 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHD6Q8TD26 AC092720.2-201ENST00000602388 1665 ntBASIC16.36■□□□□ 0.21
CHD6Q8TD26 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD6Q8TD26 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD6Q8TD26 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD6Q8TD26 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms