Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.61■□□□□ 0.41
CLHC1Q8NHS4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLHC1Q8NHS4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLHC1Q8NHS4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLHC1Q8NHS4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLHC1Q8NHS4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 MIR3180-5-201ENST00000583743 153 ntBASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLHC1Q8NHS4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 AC138028.4-201ENST00000564984 1845 ntBASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 AP003071.4-201ENST00000562276 1284 ntBASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLHC1Q8NHS4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.58■□□□□ 0.41
CLHC1Q8NHS4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.58■□□□□ 0.41
CLHC1Q8NHS4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CLHC1Q8NHS4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
CLHC1Q8NHS4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CLHC1Q8NHS4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLHC1Q8NHS4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CLHC1Q8NHS4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLHC1Q8NHS4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.58■□□□□ 0.41
CLHC1Q8NHS4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.58■□□□□ 0.41
CLHC1Q8NHS4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 AP000593.1-201ENST00000393668 712 ntBASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 TSPY7P-201ENST00000431358 1114 ntBASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 CA15P1-201ENST00000481698 905 ntBASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms