Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 MIR149-201ENST00000384879 89 ntBASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 KRT126P-201ENST00000549467 1181 ntBASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 PRELID1P1-202ENST00000567272 903 ntBASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 GPR32P1-201ENST00000601788 811 ntBASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 AC009102.3-201ENST00000623118 1491 ntBASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CNEP1R1Q8N9A8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 IGHV3-41-201ENST00000613121 348 ntBASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 AC012313.10-201ENST00000623509 926 ntBASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.25■□□□□ 0.19
CNEP1R1Q8N9A8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 OR6D1P-202ENST00000641007 5290 ntBASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 IGHGP-201ENST00000390555 1178 ntBASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 DUSP5P1-201ENST00000441325 1139 ntBASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 AP002383.4-201ENST00000442518 975 ntBASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 LINC00265-3P-201ENST00000447588 903 ntBASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 AL390719.2-201ENST00000606993 987 ntBASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.24■□□□□ 0.19
CNEP1R1Q8N9A8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CNEP1R1Q8N9A8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CNEP1R1Q8N9A8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNEP1R1Q8N9A8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNEP1R1Q8N9A8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms