Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AL357033.4-201ENST00000617703 1807 ntBASIC18.81■□□□□ 0.6
PAF1Q8N7H5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 AC018445.3-201ENST00000624177 1945 ntBASIC18.81■□□□□ 0.6
PAF1Q8N7H5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 MIR564-202ENST00000385049 94 ntBASIC18.81■□□□□ 0.6
PAF1Q8N7H5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 MIR1224-201ENST00000408193 85 ntBASIC18.81■□□□□ 0.6
PAF1Q8N7H5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 YBX1P2-201ENST00000489612 999 ntBASIC18.81■□□□□ 0.6
PAF1Q8N7H5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 NEK4P2-201ENST00000580004 1012 ntBASIC18.81■□□□□ 0.6
PAF1Q8N7H5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 AC073508.3-201ENST00000619697 1419 ntBASIC18.81■□□□□ 0.6
PAF1Q8N7H5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.81■□□□□ 0.6
PAF1Q8N7H5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PAF1Q8N7H5 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.8■□□□□ 0.6
PAF1Q8N7H5 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PAF1Q8N7H5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PAF1Q8N7H5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PAF1Q8N7H5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.8■□□□□ 0.6
PAF1Q8N7H5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.8■□□□□ 0.6
PAF1Q8N7H5 RNF152P1-201ENST00000397754 604 ntBASIC18.8■□□□□ 0.6
PAF1Q8N7H5 AC117947.1-201ENST00000427448 529 ntBASIC18.8■□□□□ 0.6
PAF1Q8N7H5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PAF1Q8N7H5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PAF1Q8N7H5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PAF1Q8N7H5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.8■□□□□ 0.6
PAF1Q8N7H5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PAF1Q8N7H5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PAF1Q8N7H5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 Z98044.1-201ENST00000632503 1764 ntBASIC18.79■□□□□ 0.6
PAF1Q8N7H5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 DUX4L26-201ENST00000489078 1255 ntBASIC18.79■□□□□ 0.6
PAF1Q8N7H5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PAF1Q8N7H5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 AC104076.2-201ENST00000448912 469 ntBASIC18.78■□□□□ 0.6
PAF1Q8N7H5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 AC034232.1-201ENST00000506026 1064 ntBASIC18.78■□□□□ 0.6
PAF1Q8N7H5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 AC006011.2-201ENST00000621313 1158 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms