Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPSF7Q8N684 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF7Q8N684 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CPSF7Q8N684 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF7Q8N684 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF7Q8N684 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF7Q8N684 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF7Q8N684 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF7Q8N684 HTR7P1-202ENST00000624664 4411 ntBASIC17.92■□□□□ 0.46
CPSF7Q8N684 KRT8P11-201ENST00000409686 1436 ntBASIC17.92■□□□□ 0.46
CPSF7Q8N684 KSR1P1-201ENST00000446298 240 ntBASIC17.92■□□□□ 0.46
CPSF7Q8N684 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF7Q8N684 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CPSF7Q8N684 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.92■□□□□ 0.46
CPSF7Q8N684 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.92■□□□□ 0.46
CPSF7Q8N684 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CPSF7Q8N684 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CPSF7Q8N684 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF7Q8N684 AL645608.8-201ENST00000606034 2086 ntBASIC17.92■□□□□ 0.46
CPSF7Q8N684 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.92■□□□□ 0.46
CPSF7Q8N684 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF7Q8N684 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF7Q8N684 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF7Q8N684 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF7Q8N684 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CPSF7Q8N684 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CPSF7Q8N684 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CPSF7Q8N684 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 KRT16P1-201ENST00000399124 1418 ntBASIC17.91■□□□□ 0.46
CPSF7Q8N684 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.91■□□□□ 0.46
CPSF7Q8N684 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.91■□□□□ 0.46
CPSF7Q8N684 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.91■□□□□ 0.46
CPSF7Q8N684 RBM17P1-201ENST00000453646 1190 ntBASIC17.91■□□□□ 0.46
CPSF7Q8N684 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.91■□□□□ 0.46
CPSF7Q8N684 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.91■□□□□ 0.46
CPSF7Q8N684 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CPSF7Q8N684 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.91■□□□□ 0.46
CPSF7Q8N684 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CPSF7Q8N684 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.91■□□□□ 0.46
CPSF7Q8N684 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
CPSF7Q8N684 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF7Q8N684 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF7Q8N684 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.9■□□□□ 0.46
CPSF7Q8N684 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.9■□□□□ 0.46
CPSF7Q8N684 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF7Q8N684 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF7Q8N684 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF7Q8N684 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
CPSF7Q8N684 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF7Q8N684 MMP23A-201ENST00000234610 1017 ntBASIC17.9■□□□□ 0.46
CPSF7Q8N684 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.9■□□□□ 0.46
CPSF7Q8N684 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
CPSF7Q8N684 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF7Q8N684 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CPSF7Q8N684 FAM210CP-201ENST00000445714 574 ntBASIC17.9■□□□□ 0.46
CPSF7Q8N684 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CPSF7Q8N684 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF7Q8N684 KRT18P21-201ENST00000515767 1272 ntBASIC17.9■□□□□ 0.46
CPSF7Q8N684 KRT18P41-201ENST00000518924 1277 ntBASIC17.9■□□□□ 0.46
CPSF7Q8N684 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.9■□□□□ 0.46
CPSF7Q8N684 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF7Q8N684 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.9■□□□□ 0.46
CPSF7Q8N684 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF7Q8N684 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF7Q8N684 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF7Q8N684 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF7Q8N684 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF7Q8N684 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF7Q8N684 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CPSF7Q8N684 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF7Q8N684 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CPSF7Q8N684 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF7Q8N684 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CPSF7Q8N684 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
CPSF7Q8N684 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CPSF7Q8N684 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CPSF7Q8N684 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF7Q8N684 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF7Q8N684 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF7Q8N684 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF7Q8N684 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CPSF7Q8N684 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CPSF7Q8N684 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms