Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 TOB2P1-201ENST00000469761 992 ntBASIC19.85■□□□□ 0.77
VPS52Q8N1B4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 FEM1AP3-201ENST00000403722 1741 ntBASIC19.85■□□□□ 0.77
VPS52Q8N1B4 KRT8P10-201ENST00000450021 1447 ntBASIC19.85■□□□□ 0.77
VPS52Q8N1B4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 TSPY19P-201ENST00000418461 509 ntBASIC19.84■□□□□ 0.77
VPS52Q8N1B4 TSPY18P-201ENST00000441642 509 ntBASIC19.84■□□□□ 0.77
VPS52Q8N1B4 AP003733.1-201ENST00000491725 852 ntBASIC19.84■□□□□ 0.77
VPS52Q8N1B4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 AC005332.3-201ENST00000589904 676 ntBASIC19.84■□□□□ 0.77
VPS52Q8N1B4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 KRT8P32-201ENST00000512863 1461 ntBASIC19.84■□□□□ 0.77
VPS52Q8N1B4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS52Q8N1B4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 EMBP1-201ENST00000458200 901 ntBASIC19.83■□□□□ 0.77
VPS52Q8N1B4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 AC012615.1-201ENST00000565797 1299 ntBASIC19.83■□□□□ 0.77
VPS52Q8N1B4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.83■□□□□ 0.77
VPS52Q8N1B4 AL121772.3-201ENST00000610840 674 ntBASIC19.83■□□□□ 0.77
VPS52Q8N1B4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.83■□□□□ 0.76
VPS52Q8N1B4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VPS52Q8N1B4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VPS52Q8N1B4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VPS52Q8N1B4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VPS52Q8N1B4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
VPS52Q8N1B4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.83■□□□□ 0.76
VPS52Q8N1B4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VPS52Q8N1B4 AC026471.1-201ENST00000564629 3026 ntBASIC19.83■□□□□ 0.76
VPS52Q8N1B4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VPS52Q8N1B4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VPS52Q8N1B4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 PVRIG2P-201ENST00000435460 978 ntBASIC19.82■□□□□ 0.76
VPS52Q8N1B4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 FOSL1P1-201ENST00000511041 816 ntBASIC19.82■□□□□ 0.76
VPS52Q8N1B4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 AC091304.2-201ENST00000564639 760 ntBASIC19.82■□□□□ 0.76
VPS52Q8N1B4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 AC034236.2-201ENST00000606662 1610 ntBASIC19.82■□□□□ 0.76
VPS52Q8N1B4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VPS52Q8N1B4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
VPS52Q8N1B4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS52Q8N1B4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS52Q8N1B4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VPS52Q8N1B4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS52Q8N1B4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
VPS52Q8N1B4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
VPS52Q8N1B4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS52Q8N1B4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms