Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 ZNF259P1-201ENST00000407656 1365 ntBASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 AP002414.3-201ENST00000589352 1468 ntBASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 ANO7L1-203ENST00000602586 1720 ntBASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 KRT18P27-201ENST00000427733 1299 ntBASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 AL591424.1-201ENST00000442569 1213 ntBASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 AC005082.1-201ENST00000413042 2259 ntBASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 AC027601.4-201ENST00000611259 610 ntBASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 AC107918.4-202ENST00000641623 219 ntBASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.18■□□□□ 0.34
COL27A1Q8IZC6 AC010460.3-201ENST00000511359 1579 ntBASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL27A1Q8IZC6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 AC132938.6-201ENST00000623828 1655 ntBASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms