Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 AC024243.1-201ENST00000609234 778 ntBASIC22.67■■□□□ 1.22
SMC5Q8IY18 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
SMC5Q8IY18 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
SMC5Q8IY18 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMC5Q8IY18 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMC5Q8IY18 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SMC5Q8IY18 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMC5Q8IY18 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SMC5Q8IY18 KRT18P55-202ENST00000578578 1546 ntBASIC22.67■■□□□ 1.22
SMC5Q8IY18 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.66■■□□□ 1.22
SMC5Q8IY18 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC22.66■■□□□ 1.22
SMC5Q8IY18 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.66■■□□□ 1.22
SMC5Q8IY18 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC22.66■■□□□ 1.22
SMC5Q8IY18 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC22.66■■□□□ 1.22
SMC5Q8IY18 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.66■■□□□ 1.22
SMC5Q8IY18 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.66■■□□□ 1.22
SMC5Q8IY18 REEP1-209ENST00000541910 969 ntTSL 2 BASIC22.66■■□□□ 1.22
SMC5Q8IY18 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
SMC5Q8IY18 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.66■■□□□ 1.22
SMC5Q8IY18 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SMC5Q8IY18 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
SMC5Q8IY18 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMC5Q8IY18 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMC5Q8IY18 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMC5Q8IY18 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SMC5Q8IY18 AC132938.6-201ENST00000623828 1655 ntBASIC22.65■■□□□ 1.22
SMC5Q8IY18 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMC5Q8IY18 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC22.65■■□□□ 1.22
SMC5Q8IY18 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC22.65■■□□□ 1.22
SMC5Q8IY18 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMC5Q8IY18 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.65■■□□□ 1.22
SMC5Q8IY18 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC22.65■■□□□ 1.22
SMC5Q8IY18 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.65■■□□□ 1.22
SMC5Q8IY18 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.65■■□□□ 1.22
SMC5Q8IY18 MIR3917-201ENST00000580971 93 ntBASIC22.65■■□□□ 1.22
SMC5Q8IY18 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMC5Q8IY18 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMC5Q8IY18 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMC5Q8IY18 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SMC5Q8IY18 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC22.65■■□□□ 1.22
SMC5Q8IY18 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMC5Q8IY18 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMC5Q8IY18 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
SMC5Q8IY18 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMC5Q8IY18 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SMC5Q8IY18 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
SMC5Q8IY18 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.64■■□□□ 1.21
SMC5Q8IY18 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.64■■□□□ 1.21
SMC5Q8IY18 ECEL1P3-201ENST00000427961 737 ntBASIC22.64■■□□□ 1.21
SMC5Q8IY18 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.64■■□□□ 1.21
SMC5Q8IY18 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.64■■□□□ 1.21
SMC5Q8IY18 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SMC5Q8IY18 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
SMC5Q8IY18 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC22.64■■□□□ 1.21
SMC5Q8IY18 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMC5Q8IY18 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
SMC5Q8IY18 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMC5Q8IY18 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
SMC5Q8IY18 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SMC5Q8IY18 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SMC5Q8IY18 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMC5Q8IY18 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMC5Q8IY18 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SMC5Q8IY18 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
SMC5Q8IY18 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
SMC5Q8IY18 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SMC5Q8IY18 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMC5Q8IY18 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SMC5Q8IY18 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.63■■□□□ 1.21
SMC5Q8IY18 DUTP2-201ENST00000519164 463 ntBASIC22.63■■□□□ 1.21
SMC5Q8IY18 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
SMC5Q8IY18 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
SMC5Q8IY18 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC22.63■■□□□ 1.21
SMC5Q8IY18 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC22.63■■□□□ 1.21
SMC5Q8IY18 AC020916.1-201ENST00000587762 1774 ntBASIC22.63■■□□□ 1.21
SMC5Q8IY18 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
SMC5Q8IY18 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC22.63■■□□□ 1.21
SMC5Q8IY18 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC22.63■■□□□ 1.21
SMC5Q8IY18 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC5Q8IY18 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
SMC5Q8IY18 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
SMC5Q8IY18 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
SMC5Q8IY18 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC5Q8IY18 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms