Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 LINC01311-201ENST00000565162 1445 ntBASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 AL024508.2-201ENST00000607749 1894 ntBASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 AL136038.4-201ENST00000603606 1261 ntBASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCUBE3Q8IX30 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 HLA-F-220ENST00000434407 884 ntBASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 AL671277.2-201ENST00000458060 996 ntBASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCUBE3Q8IX30 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 AL031133.1-201ENST00000406807 723 ntBASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 BICD1-207ENST00000551848 1962 ntBASIC19.23■□□□□ 0.67
SCUBE3Q8IX30 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCUBE3Q8IX30 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCUBE3Q8IX30 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.22■□□□□ 0.67
SCUBE3Q8IX30 AC093677.2-201ENST00000600169 1863 ntBASIC19.22■□□□□ 0.67
SCUBE3Q8IX30 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCUBE3Q8IX30 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCUBE3Q8IX30 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.22■□□□□ 0.67
SCUBE3Q8IX30 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCUBE3Q8IX30 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.22■□□□□ 0.67
SCUBE3Q8IX30 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCUBE3Q8IX30 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms