Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 MIR564-202ENST00000385049 94 ntBASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 AL353692.3-201ENST00000407031 1396 ntBASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 AC211486.1-202ENST00000416371 468 ntBASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 AC211476.1-201ENST00000503899 468 ntBASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RP1L1Q8IWN7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 GUSBP12-201ENST00000513727 720 ntBASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 KRT89P-201ENST00000620027 1478 ntBASIC16.56■□□□□ 0.24
RP1L1Q8IWN7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 AL512353.2-201ENST00000448759 1962 ntBASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 SCARNA2-201ENST00000458748 420 ntBASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 AL355877.3-201ENST00000622820 899 ntBASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 TREX1-205ENST00000625293 1783 ntBASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms