Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VRK2Q86Y07 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.96■□□□□ 0.3
VRK2Q86Y07 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.96■□□□□ 0.3
VRK2Q86Y07 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VRK2Q86Y07 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.95■□□□□ 0.3
VRK2Q86Y07 CYP2D8P-201ENST00000433633 1490 ntBASIC16.95■□□□□ 0.3
VRK2Q86Y07 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 MIR149-201ENST00000384879 89 ntBASIC16.95■□□□□ 0.3
VRK2Q86Y07 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.95■□□□□ 0.3
VRK2Q86Y07 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.95■□□□□ 0.3
VRK2Q86Y07 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.95■□□□□ 0.3
VRK2Q86Y07 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.95■□□□□ 0.3
VRK2Q86Y07 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VRK2Q86Y07 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.95■□□□□ 0.3
VRK2Q86Y07 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
VRK2Q86Y07 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK2Q86Y07 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
VRK2Q86Y07 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK2Q86Y07 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
VRK2Q86Y07 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.94■□□□□ 0.3
VRK2Q86Y07 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VRK2Q86Y07 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VRK2Q86Y07 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK2Q86Y07 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VRK2Q86Y07 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK2Q86Y07 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VRK2Q86Y07 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.94■□□□□ 0.3
VRK2Q86Y07 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
VRK2Q86Y07 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VRK2Q86Y07 TSPY14P-201ENST00000303979 915 ntBASIC16.94■□□□□ 0.3
VRK2Q86Y07 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
VRK2Q86Y07 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VRK2Q86Y07 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.94■□□□□ 0.3
VRK2Q86Y07 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.94■□□□□ 0.3
VRK2Q86Y07 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK2Q86Y07 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VRK2Q86Y07 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.94■□□□□ 0.3
VRK2Q86Y07 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.94■□□□□ 0.3
VRK2Q86Y07 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK2Q86Y07 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.94■□□□□ 0.3
VRK2Q86Y07 KRT8P7-201ENST00000533003 1432 ntBASIC16.94■□□□□ 0.3
VRK2Q86Y07 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VRK2Q86Y07 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK2Q86Y07 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VRK2Q86Y07 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK2Q86Y07 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.93■□□□□ 0.3
VRK2Q86Y07 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.93■□□□□ 0.3
VRK2Q86Y07 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.93■□□□□ 0.3
VRK2Q86Y07 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.93■□□□□ 0.3
VRK2Q86Y07 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.93■□□□□ 0.3
VRK2Q86Y07 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.93■□□□□ 0.3
VRK2Q86Y07 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
VRK2Q86Y07 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.93■□□□□ 0.3
VRK2Q86Y07 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.93■□□□□ 0.3
VRK2Q86Y07 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VRK2Q86Y07 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK2Q86Y07 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK2Q86Y07 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.92■□□□□ 0.3
VRK2Q86Y07 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms