Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.12□□□□□ -0.47
SCXQ7RTU7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC12.12□□□□□ -0.47
SCXQ7RTU7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 PRSS44-201ENST00000515154 1146 ntBASIC12.12□□□□□ -0.47
SCXQ7RTU7 AP003041.3-201ENST00000527151 707 ntBASIC12.12□□□□□ -0.47
SCXQ7RTU7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 AP000997.3-201ENST00000623333 2250 ntBASIC12.12□□□□□ -0.47
SCXQ7RTU7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCXQ7RTU7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.12□□□□□ -0.47
SCXQ7RTU7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 KRT8P11-201ENST00000409686 1436 ntBASIC12.11□□□□□ -0.47
SCXQ7RTU7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 PWWP2AP1-201ENST00000429776 2273 ntBASIC12.11□□□□□ -0.47
SCXQ7RTU7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 AL032819.2-201ENST00000624543 2162 ntBASIC12.11□□□□□ -0.47
SCXQ7RTU7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 AL358472.4-201ENST00000633140 710 ntBASIC12.11□□□□□ -0.47
SCXQ7RTU7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 MYC-208ENST00000641036 567 ntBASIC12.11□□□□□ -0.47
SCXQ7RTU7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
SCXQ7RTU7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCXQ7RTU7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms