Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 AC139887.4-201ENST00000607877 719 ntBASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CHMP1BQ7LBR1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.89■□□□□ 0.3
CHMP1BQ7LBR1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 RNF152P1-201ENST00000397754 604 ntBASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 AC104076.2-201ENST00000448912 469 ntBASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 IRX1P1-201ENST00000438849 1838 ntBASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP1BQ7LBR1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP1BQ7LBR1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP1BQ7LBR1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP1BQ7LBR1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP1BQ7LBR1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP1BQ7LBR1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP1BQ7LBR1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.87■□□□□ 0.29
CHMP1BQ7LBR1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms