Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 AC099343.3-201ENST00000605834 2503 ntBASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 NTF6B-201ENST00000591913 560 ntBASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PPP4R3AQ6IN85 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 AL024508.2-201ENST00000607749 1894 ntBASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 AL671277.2-201ENST00000458060 996 ntBASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP4R3AQ6IN85 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 GMCL1P1-201ENST00000463439 1581 ntBASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 AL031133.1-201ENST00000406807 723 ntBASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 MIR1224-201ENST00000408193 85 ntBASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 AC083849.1-201ENST00000615227 514 ntBASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 AC104581.1-202ENST00000635932 2618 ntBASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 LINC01311-201ENST00000565162 1445 ntBASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.78■□□□□ 0.92
PPP4R3AQ6IN85 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 SPDYE13P-201ENST00000445314 798 ntBASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 AC010331.1-201ENST00000611423 582 ntBASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 LINC01126-201ENST00000623515 1646 ntBASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.77■□□□□ 0.92
PPP4R3AQ6IN85 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms