Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 AL356309.3-201ENST00000624132 1934 ntBASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 AC125634.1-201ENST00000438758 1403 ntBASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 AC098831.1-202ENST00000438821 336 ntBASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 AC083906.6-201ENST00000641366 219 ntBASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 AL024508.2-201ENST00000607749 1894 ntBASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 AC099343.3-201ENST00000605834 2503 ntBASIC17.92■□□□□ 0.46
LYSMD4Q5XG99 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 AL032819.2-201ENST00000624543 2162 ntBASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 AL158211.5-201ENST00000623583 2518 ntBASIC17.91■□□□□ 0.46
LYSMD4Q5XG99 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 SDHAP2-201ENST00000455183 2001 ntBASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 Z83851.2-201ENST00000609564 659 ntBASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 AL139288.1-201ENST00000623748 933 ntBASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD4Q5XG99 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.89■□□□□ 0.46
LYSMD4Q5XG99 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 LINC00602-201ENST00000629776 2065 ntBASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 MYLKP1-201ENST00000509077 1580 ntBASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms