Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.84■□□□□ 0.45
SGO1Q5FBB7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 SNORA78-201ENST00000459373 127 ntBASIC17.84■□□□□ 0.45
SGO1Q5FBB7 CA15P1-201ENST00000481698 905 ntBASIC17.84■□□□□ 0.45
SGO1Q5FBB7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 MIR4785-201ENST00000585005 73 ntBASIC17.84■□□□□ 0.45
SGO1Q5FBB7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SGO1Q5FBB7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SGO1Q5FBB7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SGO1Q5FBB7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.83■□□□□ 0.45
SGO1Q5FBB7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SGO1Q5FBB7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.83■□□□□ 0.45
SGO1Q5FBB7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 MIR1238-201ENST00000408483 83 ntBASIC17.83■□□□□ 0.44
SGO1Q5FBB7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 MIR3180-5-201ENST00000583743 153 ntBASIC17.83■□□□□ 0.44
SGO1Q5FBB7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 AC034236.2-201ENST00000606662 1610 ntBASIC17.83■□□□□ 0.44
SGO1Q5FBB7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SGO1Q5FBB7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 AP003041.3-201ENST00000527151 707 ntBASIC17.82■□□□□ 0.44
SGO1Q5FBB7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 AP005242.2-201ENST00000580065 1175 ntBASIC17.82■□□□□ 0.44
SGO1Q5FBB7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 AP006294.2-201ENST00000641667 209 ntBASIC17.82■□□□□ 0.44
SGO1Q5FBB7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SGO1Q5FBB7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGO1Q5FBB7 KRT8P50-201ENST00000562022 1438 ntBASIC17.81■□□□□ 0.44
SGO1Q5FBB7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGO1Q5FBB7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGO1Q5FBB7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGO1Q5FBB7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGO1Q5FBB7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGO1Q5FBB7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms