Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCSMST1Q4G0I0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCSMST1Q4G0I0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCSMST1Q4G0I0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 HBZP1-201ENST00000354915 429 ntBASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 VENTXP5-201ENST00000523979 775 ntBASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 AC083849.1-201ENST00000615227 514 ntBASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCSMST1Q4G0I0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 HLA-F-220ENST00000434407 884 ntBASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 LINC01311-201ENST00000565162 1445 ntBASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.77■□□□□ 0.44
CCSMST1Q4G0I0 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.77■□□□□ 0.43
CCSMST1Q4G0I0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.77■□□□□ 0.43
CCSMST1Q4G0I0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCSMST1Q4G0I0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.77■□□□□ 0.43
CCSMST1Q4G0I0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCSMST1Q4G0I0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.77■□□□□ 0.43
CCSMST1Q4G0I0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCSMST1Q4G0I0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 AL671277.2-201ENST00000458060 996 ntBASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.76■□□□□ 0.43
CCSMST1Q4G0I0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCSMST1Q4G0I0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.75■□□□□ 0.43
CCSMST1Q4G0I0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CCSMST1Q4G0I0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCSMST1Q4G0I0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCSMST1Q4G0I0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.75■□□□□ 0.43
CCSMST1Q4G0I0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms