Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 CA15P1-201ENST00000481698 905 ntBASIC20.83■□□□□ 0.93
LONRF3Q496Y0 AP003041.3-201ENST00000527151 707 ntBASIC20.83■□□□□ 0.93
LONRF3Q496Y0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 AL353719.1-201ENST00000566847 864 ntBASIC20.83■□□□□ 0.93
LONRF3Q496Y0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LONRF3Q496Y0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.83■□□□□ 0.92
LONRF3Q496Y0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
LONRF3Q496Y0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LONRF3Q496Y0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LONRF3Q496Y0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LONRF3Q496Y0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LONRF3Q496Y0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
LONRF3Q496Y0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 TSPY17P-201ENST00000450329 467 ntBASIC20.82■□□□□ 0.92
LONRF3Q496Y0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LONRF3Q496Y0 AC034236.2-201ENST00000606662 1610 ntBASIC20.82■□□□□ 0.92
LONRF3Q496Y0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 YBX1P2-201ENST00000489612 999 ntBASIC20.81■□□□□ 0.92
LONRF3Q496Y0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 AC010653.2-201ENST00000623505 997 ntBASIC20.81■□□□□ 0.92
LONRF3Q496Y0 AC141257.4-201ENST00000634557 245 ntBASIC20.81■□□□□ 0.92
LONRF3Q496Y0 AC136944.6-201ENST00000634818 245 ntBASIC20.81■□□□□ 0.92
LONRF3Q496Y0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 REXO1L9P-201ENST00000604264 2108 ntBASIC20.81■□□□□ 0.92
LONRF3Q496Y0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LONRF3Q496Y0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms