Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC144BQ3MJ40 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144BQ3MJ40 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.26■□□□□ 0.99
CCDC144BQ3MJ40 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC144BQ3MJ40 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC144BQ3MJ40 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144BQ3MJ40 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC144BQ3MJ40 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144BQ3MJ40 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144BQ3MJ40 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC144BQ3MJ40 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC144BQ3MJ40 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 BX276092.5-203ENST00000456199 560 ntBASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 AL121672.3-201ENST00000608644 468 ntBASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 AC079602.3-201ENST00000623931 403 ntBASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC144BQ3MJ40 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 KRT8P3-201ENST00000519669 1449 ntBASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144BQ3MJ40 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 PRELID1P1-202ENST00000567272 903 ntBASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 MIR3180-1-201ENST00000580374 94 ntBASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 MIR3180-3-201ENST00000584616 94 ntBASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 AL162741.1-201ENST00000565563 1558 ntBASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC144BQ3MJ40 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144BQ3MJ40 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCDC144BQ3MJ40 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144BQ3MJ40 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC144BQ3MJ40 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms