Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 MTDHP3-201ENST00000594186 672 ntBASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 AC011467.2-201ENST00000598425 242 ntBASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 AC125634.1-201ENST00000438758 1403 ntBASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 KRT18P58-201ENST00000527480 1120 ntBASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 AC009533.2-201ENST00000543664 586 ntBASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM71Q2Q1W2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 SCARNA2-201ENST00000458748 420 ntBASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 AC139887.3-201ENST00000568585 713 ntBASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM71Q2Q1W2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 LINC01126-201ENST00000623515 1646 ntBASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 AC093909.1-201ENST00000504731 1122 ntBASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 AC073648.2-201ENST00000510116 352 ntBASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TRIM71Q2Q1W2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM71Q2Q1W2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM71Q2Q1W2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM71Q2Q1W2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM71Q2Q1W2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM71Q2Q1W2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM71Q2Q1W2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms