Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 FAM207BP-201ENST00000447172 505 ntBASIC14.04□□□□□ -0.16
HIST1H1AQ02539 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 RARRES2P10-201ENST00000564312 460 ntBASIC14.04□□□□□ -0.16
HIST1H1AQ02539 AC026271.3-201ENST00000571884 352 ntBASIC14.04□□□□□ -0.16
HIST1H1AQ02539 AF186192.3-201ENST00000583427 947 ntBASIC14.04□□□□□ -0.16
HIST1H1AQ02539 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.04□□□□□ -0.16
HIST1H1AQ02539 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.04□□□□□ -0.16
HIST1H1AQ02539 AC126763.1-201ENST00000552015 2118 ntBASIC14.03□□□□□ -0.16
HIST1H1AQ02539 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 AL359736.2-201ENST00000621992 437 ntBASIC14.03□□□□□ -0.16
HIST1H1AQ02539 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 AL356309.3-201ENST00000624132 1934 ntBASIC14.03□□□□□ -0.16
HIST1H1AQ02539 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H1AQ02539 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H1AQ02539 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms