Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 MIR1238-201ENST00000408483 83 ntBASIC17.67■□□□□ 0.42
HMGCS1Q01581 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 FITM1-202ENST00000559294 800 ntBASIC17.67■□□□□ 0.42
HMGCS1Q01581 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCS1Q01581 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCS1Q01581 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCS1Q01581 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 KRT17P2-201ENST00000300992 1314 ntBASIC17.67■□□□□ 0.42
HMGCS1Q01581 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCS1Q01581 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCS1Q01581 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCS1Q01581 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCS1Q01581 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCS1Q01581 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCS1Q01581 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCS1Q01581 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCS1Q01581 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 AC092338.2-201ENST00000568827 1415 ntBASIC17.66■□□□□ 0.42
HMGCS1Q01581 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCS1Q01581 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCS1Q01581 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 KRT18P23-201ENST00000435622 1283 ntBASIC17.66■□□□□ 0.42
HMGCS1Q01581 TSPY17P-201ENST00000450329 467 ntBASIC17.66■□□□□ 0.42
HMGCS1Q01581 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCS1Q01581 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCS1Q01581 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCS1Q01581 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCS1Q01581 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCS1Q01581 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCS1Q01581 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HMGCS1Q01581 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCS1Q01581 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HMGCS1Q01581 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGCS1Q01581 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGCS1Q01581 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.65■□□□□ 0.42
HMGCS1Q01581 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGCS1Q01581 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGCS1Q01581 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
HMGCS1Q01581 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.65■□□□□ 0.42
HMGCS1Q01581 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.65■□□□□ 0.42
HMGCS1Q01581 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 AL355075.4-201ENST00000554988 638 ntBASIC17.65■□□□□ 0.42
HMGCS1Q01581 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.65■□□□□ 0.42
HMGCS1Q01581 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HMGCS1Q01581 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HMGCS1Q01581 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCS1Q01581 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HMGCS1Q01581 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
HMGCS1Q01581 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HMGCS1Q01581 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGCS1Q01581 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HMGCS1Q01581 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGCS1Q01581 AC009102.3-201ENST00000623118 1491 ntBASIC17.64■□□□□ 0.41
HMGCS1Q01581 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGCS1Q01581 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms